Plant Regulome is a data-driven interface for retrieving upstream regulators from plant multi-omics data, which integrates 19,925 transcriptomic and epigenomic data sets and diverse sources of functional evidence (58,112 terms) from six plant species, namely Arabidopsis thaliana, Oryza sativa, Zea mays, Glycine max, Solanum lycopersicum and Triticum aestivum, along with the orthologous genes from 56 whole-genome sequenced plant species. These data were well-organized to gene modules and further implemented into the same statistical framework.
For any input gene list or genomic loci, Plant Regulome retrieves the factors, treatments, and experimental/environmental conditions regulating the input from the integrated omics data. Additionally, multiple tools and an interactive visualization are available through a user-friendly web interface.
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